Database error
Varac
varac at leap.se
Thu Apr 19 11:26:21 PDT 2018
Hi,
I get a DatabaseError right after initial indexing.
I can reproduce this with my mails every time.
First, I remove the whole .notmuch/xapian directory and
run "notmuch new", which results in a DatabaseError when
using "xapian-check":
» notmuch new
Welcome to a new version of notmuch! Your database will now be upgraded.
This process is safe to interrupt.
Backing up tags to /home/varac/.offlineimap/Mail/.notmuch/dump-20180419T160138.gz...
Your notmuch database has now been upgraded.
Processed 148440 total files in 13m 38s (181 files/sec.).
Added 140351 new messages to the database.
» xapian-check .notmuch/xapian
docdata:
blocksize=8K items=564 firstunused=7 revision=7 levels=1 root=2
B-tree checked okay
docdata table structure checked OK
termlist:
blocksize=8K items=305882 firstunused=64506 revision=7 levels=2 root=63491
xapian-check: DatabaseError: 1 unused block(s) missing from the free list, first is 0
» notmuch compact
Compacting database...
compacting table postlist
Reduced by 34% 130352K (373696K -> 243344K)
compacting table docdata
Reduced by 28% 16K (56K -> 40K)
compacting table termlist
Reduced by 48% 250928K (516048K -> 265120K)
compacting table position
Reduced by 44% 455456K (1034784K -> 579328K)
compacting table spelling
doesn't exist
compacting table synonym
doesn't exist
Done.
» xapian-check .notmuch/xapian
docdata:
blocksize=8K items=564 firstunused=5 revision=1 levels=1 root=2
B-tree checked okay
docdata table structure checked OK
termlist:
blocksize=8K items=305882 firstunused=33140 revision=1 levels=2 root=746
B-tree checked okay
termlist table structure checked OK
postlist:
blocksize=8K items=2845658 firstunused=30418 revision=1 levels=2 root=578
B-tree checked okay
postlist table structure checked OK
position:
blocksize=8K items=27789188 firstunused=72416 revision=1 levels=2 root=466
B-tree checked okay
position table structure checked OK
spelling:
Lazily created, and not yet used.
synonym:
Lazily created, and not yet used.
No errors found
» dpkg -l |egrep '(notmuch|xapian)'
ii afew 1.3.0-1 all Tagging script for notmuch mail
ii libnotmuch-dev 0.26-1ubuntu3 amd64 thread-based email index, search and tagging (development)
ii libnotmuch5 0.26-1ubuntu3 amd64 thread-based email index, search and tagging (runtime)
ii libxapian30:amd64 1.4.5-1 amd64 Search engine library
ii notmuch 0.26-1ubuntu3 amd64 thread-based email index, search and tagging
ii notmuch-addrlookup 9-1 amd64 Address lookup tool for Notmuch
ii python-notmuch 0.26-1ubuntu2 all Python interface to the notmuch mail search and index library
ii python3-notmuch 0.26-1ubuntu3 all Python 3 interface to the notmuch mail search and index library
ii xapian-tools 1.4.5-1 amd64 Basic tools for Xapian search engine library
After this I try to tun "afew --tag --new -v" but it fails with (I don't know if
this is related though):
Traceback (most recent call last):
File "/usr/bin/afew", line 11, in <module>
load_entry_point('afew==1.3.0', 'console_scripts', 'afew')()
File "/usr/lib/python3/dist-packages/afew/commands.py", line 159, in main
inner_main(args, database, query_string)
File "/usr/lib/python3/dist-packages/afew/main.py", line 23, in main
filter_.run(query_string)
File "/usr/lib/python3/dist-packages/afew/filters/BaseFilter.py", line 59, in run
for message in self.database.get_messages(query):
File "/usr/lib/python3/dist-packages/afew/Database.py", line 93, in get_messages
for message in self.do_query(query).search_messages():
File "/usr/lib/python3/dist-packages/notmuch/query.py", line 182, in search_messages
raise NotmuchError(status)
notmuch.errors.XapianError
Please help! I kind of lost here.
Greetings, Varac
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